Publications
Forthcoming
Giarla, T. C., Achmadi, A.S., Fabre, P. H., Handika, H. , Chipps, A. S., Swanson, M.T., Nations, J. A., Morni, M. A., William-Dee, J., Inayah, N., Jayanti, E. D., Nurdin, M.R.T.J., Griffin, K. E., Khan, F. A. A., Heaney, L. R., Rowe, K. C., Esselstyn, J. A. Accepted. Systematics and historical biogeography of Crunomys and Maxomys (Muridae: Murinae), with the description of a new species from Sulawesi and new genus-level classification. Journal of Mammalogy.
Nations, J.A., Kohli, B.A., Handika, H. , Achmadi, A.S., Polito, M.J., Rowe, K.C. and Esselstyn, J. A. Accepted. The roles of isolation and interspecific interaction in generating the functional diversity of an insular mammal radiation. Oikos.
2024
Handika, H. and Esselstyn, J. A. 2024. SEGUL: Ultrafast, memory-efficient and mobile-friendly software for manipulating and summarizing phylogenomic datasets. Molecular Ecology Resources, 24(7). https://doi.org/10.1111/1755-0998.13964
Nations, J. A., Handika, H. , Mursyid, A., Butsa, R. D., Apandi, Achmadi, A. S. Esselstyn, J. A. 2024. Three new species of shrew (Soricidae: Crocidura) from West Sumatra, Indonesia: elevational and morphological divergence in syntopic sister taxa. Journal of Mammalogy, 105 (2), 372-389. https://doi.org/10.1093/jmammal/gyad126
2023
Mursyid, A., Achmadi, A.S., Novarino, W., Handika, H. , Nugroho, H.A., Anita, S., Adams, A.L., Rowe, K.M.C. and Rowe, K.C. 2023. Trypanosoma (Euglenozoa: Kinetoplastea) infections in rodents, bats, and shrews along an elevation and disturbance gradient in Central Sulawesi, Indonesia. Contributions to Mammalogy and Zooarchaeology of Wallacea, pp.663-671. http://dx.doi.org/10.3853/j.2201-4349.75.2023.1786
Achmadi, A. S., Fahri, F., Gazzard, A., Handika, H. , Inayah, N., Kennerley, R. J., Lanusi, A. A., Nangoy, M., Nurdin, M. R., Rowe, K. C., Sheherazade. 2023. Conservation status and priorities for Sulawesi's unique small mammal fauna. Journal of Mammalogy, 104 (3), 1-12. https://doi.org/10.1093/jmammal/gyad126
Swanson, M.T., Henson, M.W., Handika, H. , Achmadi, A.S., Anita, S., Rowe, K.C. and Esselstyn, J.A. 2023. Mycoplasmataceae dominate microbial community differences between gut regions in mammals with a simple gut architecture. Journal of Mammalogy, 104(1), pp.146-158. https://doi.org/10.1093/jmammal/gyac098
2021
Esselstyn, J.A., Achmadi, A.S., Handika, H. , Swanson, M. T., Giarla, T.C. and Rowe, K.C. 2021. Fourteen new, endemic species of shrew (genus Crocidura) from Sulawesi reveal a spectacular island radiation. Bulletin of the American Museum of Natural History, 454(1), pp.1-108. https://doi.org/10.1206/0003-0090.454.1.1
Handika, H. , Achmadi, A.S., Esselstyn, J.A., and Rowe, K.C. 2021. Molecular and morphological systematics of the Bunomys division (Rodentia: Muridae), an endemic radiation on Sulawesi. Zoologica Scripta, 50(2), pp. 141–154. https://doi.org/10.1111/zsc.12460
Nations, J.A., Mursyid, A., Darma Busta, R., Adrian, S.P., Handika, H. , Apandi, Achmadi, A.S. and Esselstyn, J.A. 2021. The first report of albinism in a Sundaland endemic rodent. Mammalia, 85(2), pp.168-172. https://doi.org/10.1515/mammalia-2020-0047
2020
Harapan, T.S., Agung, A.P., Handika, H. , Novarino, W., Tjong, D.H. and Tomlinson, K.W. 2020. ew records and potential geographic distribution of Elongated Caecilian, Ichthyophis elongatus Taylor, 1965 (Amphibia, Gymnophiona, Ichthyophiidae), endemic to West Sumatra, Indonesia. Check List, , 16(6), pp. 1695-1701. https://doi.org/10.15560/16.6.1695
Winterhoff, M.L., Achmadi, A.S., Roycroft, E.J., Handika, H. , Putra, R.T.J., Rowe, K.M.C., Perkins, S. and Rowe, K.C. 2020. Native and introduced trypanosome parasites in endemic and introduced murine rodents of Sulawesi. Journal of Parasitology, 106(5), pp.523-536. https://doi.org/10.1645/19-136
2019 and earlier
Esselstyn, J.A., Achmadi, A.S., Handika, H. , Giarla, T.C. and Rowe, K.C. 2019. A new climbing shrew from Sulawesi highlights the tangled taxonomy of an endemic radiation. Journal of Mammalogy, 100(6), pp.1713-1725. https://doi.org/10.1093/jmammal/gyz077
Janra, M.N., Noske, R.A., Chornelia, A., Handika, H. , Mursyid, A., Agung, A. and Saputra, A. 2018. A second breeding record of Chestnut-naped Forktails Enicurus ruficapillus in Sumatra, and observations suggesting females alone incubate. Kukila, 21, pp.13-16.
Demos, T.C., Achmadi, A.S., Handika, H. , Rowe, K.C. and Esselstyn, J.A. 2017. A new species of shrew (Soricomorpha: Crocidura) from Java, Indonesia: possible character displacement despite interspecific gene flow. Journal of Mammalogy, 98(1), pp.183-193. https://doi.org/10.1093/jmammal/gyw183
Demos, T.C., Achmadi, A.S., Giarla, T.C., Handika, H. , Rowe, K.C. and Esselstyn, J.A. 2016. Local endemism and within‐island diversification of shrews illustrate the importance of speciation in building Sundaland mammal diversity. Molecular ecology, 25(20), pp.5158-5173. https://doi.org/10.1111/mec.13820
Esselstyn, J.A., Achmadi, A.S., Handika, H. and Rowe, K.C. 2015. A hog-nosed shrew rat (Rodentia: Muridae) from Sulawesi Island, Indonesia. Journal of Mammalogy, 96(5), pp.895-907. https://doi.org/10.1093/jmammal/gyv093
Handika, H. , Nurdin, J. and Rizaldi. 2013. Small Terrestrial Mammals Community on Mount Singgalang, West Sumatra. Jurnal Biologi Universitas Andalas, 2(2), pp.103-109. https://doi.org/10.25077/jbioua.2.2.%25p.2013